pen-stack
Open infrastructure for genome writing: the Writable Genome (learned safe+durable insertion-site atlas), the Writer Atlas of 33k genome-writing enzymes, an inverse-design Write Planner, and a bridge-recombinase off-target engine. Consolidates 5 prior repos. Pre-registered, blind-validated, single install.
- Latest release
- 17m ago
- Releases
- 12
- Known CVEs
- 0
- First release
- Jun 04, 2026
- License
- MIT
Repository
Source
- Stars
- 1
- Forks
- 0
- Open issues
- 0
- Language
- Python
- bioinformatics
- bridge-recombinase
- computational-biology
- crispr
- gene-therapy
- genome-engineering
- genome-writing
- inverse-design
Security score
No OpenSSF Scorecard available for this repository.
Packages from this repo
No other tracked packages from this repository.
Insights
Activity
- Total releases
- 12
- Last 12 months
- 12
- Cadence
- ~daily
- Dependencies
- 37
Releases per month
last 12 monthsRelease mix
- major 2
- minor 5
- patch 4
12
releases
Dependencies
Depends on
5.1.0-
beautifulsoup4
>=4.12
-
biopython
>=1.84
-
bridgernadesigner
>=0.1.1
-
click
>=8.1
-
fastapi
>=0.111
-
fastmcp
>=2.3
-
gymnasium
>=0.29
-
lightgbm
>=4.5
-
litellm
>=1.44
-
mkdocs
>=1.6
1–10 of 37
Used by
Nothing tracked depends on this yet.
Releases
| Version | Released | |
|---|---|---|
5.1.0
minor
| ||
5.0.0
major
| ||
4.5.1
patch
| ||
4.5.0
minor
| ||
4.0.3
patch
| ||
4.0.2
patch
| ||
4.0.1
patch
| ||
4.0.0
major
| ||
3.4.0
minor
| ||
3.3.0
minor
| ||
3.2.0
minor
| ||
3.1.0
initial
|