CNVkit
Copy number variation toolkit for high-throughput sequencing.
- Latest release
- Feb 03, 2026
- Releases
- 52
- Known CVEs
- 0
- First release
- Sep 02, 2014
- License
- Apache-2.0
Repository
Source
- Stars
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- Forks
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Security score
No OpenSSF Scorecard available for this repository.
Packages from this repo
Insights
Activity
- Total releases
- 52
- Last 12 months
- 2
- Cadence
- ~23 days
- Dependencies
- 17
Releases per month
last 12 monthsRelease mix
- minor 7
- patch 42
- pre 2
52
releases
Dependencies
Depends on
0.9.13-
bandit
-
biopython
>=1.85
-
coverage
-
matplotlib
>=3.9.0
-
numpy
>=2.2.3
-
pandas
>=2.2.3
-
pomegranate
>=1.0.0
-
pyfaidx
>=0.8.1.3
-
pyparsing
<3.3.0,>=3.1.2
-
pysam
>=0.23.0
1–10 of 17
Used by
Nothing tracked depends on this yet.
Releases
| Version | Released | |
|---|---|---|
0.9.13
patch
| ||
0.9.12
patch
| ||
0.9.11
patch
| ||
0.9.10
patch
| ||
0.9.9
patch
| ||
0.9.8
patch
| ||
0.9.7
patch
| ||
0.9.7b1
pre
| ||
0.9.7b0
pre
| ||
0.9.6
patch
| ||
0.9.5
patch
| ||
0.9.4
patch
| ||
0.9.3
patch
| ||
0.9.1
patch
| ||
0.9.0
minor
| ||
0.8.5
patch
| ||
0.8.4
patch
| ||
0.8.3
patch
| ||
0.8.2
patch
| ||
0.8.1
patch
|
1–20 of 52